{"count":4,"items":[{"access":"open","article":"/blog/modele-prezentacji-antygenu","cancer_slugs":["pan-cancer"],"doi":null,"formats":["CSV","JSON"],"hf":null,"huggingface":null,"kind":"registry","license":"free to use; NIAID-funded public resource","modalities":["protein-sequence","immunopeptidomics"],"name":"IEDB \u2014 Immune Epitope Database","page":"/ai-oncology/datasets/iedb","provider":"La Jolla Institute for Immunology, funded by NIAID","size":{"items":1600000,"notes_en":"curated from published literature and direct submissions; includes MHC binding assays, MS-eluted ligands and T-cell assays","notes_pl":"kuratorowane z literatury i zg\u0142osze\u0144 bezpo\u015brednich; zawiera testy wi\u0105zania MHC, ligandy ze spektrometru i testy limfocyt\u00f3w T","unit":"epitope-related records"},"slug":"iedb","summary":"The field's central repository of epitope data and the source of almost every training set for peptide\u2013MHC models \u2014 and of their allele skew.","tasks":["peptide-mhc-binding","antigen-presentation"],"url":"https://www.iedb.org/","verified_at":"2026-09-05T22:25:59.114121"},{"access":"open","article":"/blog/modele-prezentacji-antygenu","cancer_slugs":["pan-cancer"],"doi":"10.1038/s41587-019-0322-9","formats":["CSV","text"],"hf":null,"huggingface":null,"kind":"dataset","license":"published supplementary data (see papers)","modalities":["immunopeptidomics","protein-sequence"],"name":"Mono-allelic HLA class I peptidome (Sarkizova / Abelin)","page":"/ai-oncology/datasets/monoallelic-peptidome","provider":"Broad Institute / Dana-Farber Cancer Institute","size":{"items":186464,"notes_en":"95 mono-allelic cell lines (31 HLA-A, 40 HLA-B, 21 HLA-C, 3 HLA-G), median 1,860 peptides per allele; the earlier Abelin 2017 set covered 16 alleles and >24,000 peptides","notes_pl":"95 linii monoallelicznych (31 HLA-A, 40 HLA-B, 21 HLA-C, 3 HLA-G), mediana 1860 peptyd\u00f3w na allel; wcze\u015bniejszy zbi\u00f3r Abelin 2017 obj\u0105\u0142 16 alleli i ponad 24 000 peptyd\u00f3w","unit":"peptides"},"slug":"monoallelic-peptidome","summary":"The engineered-cell peptidome that gave the field clean allele labels; fifteen of its alleles had no described motif before, and the panel covers at least one allele in 95% of people worldwide.","tasks":["antigen-presentation","peptide-mhc-binding"],"url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC7008090/","verified_at":"2026-09-05T22:25:59.152441"},{"access":"open","article":"/blog/modele-prezentacji-antygenu","cancer_slugs":["pan-cancer"],"doi":null,"formats":["CSV"],"hf":null,"huggingface":null,"kind":"dataset","license":"CC BY 4.0","modalities":["immunopeptidomics"],"name":"HLA Ligand Atlas","page":"/ai-oncology/datasets/hla-ligand-atlas","provider":"University of T\u00fcbingen (Rammensee / Walz groups)","size":{"items":90428,"notes_en":"29 tissue types from 21 donors \u2014 benign tissue, which is what makes it a reference for what is NOT tumour-specific","notes_pl":"29 rodzaj\u00f3w tkanek od 21 dawc\u00f3w \u2014 tkanki prawid\u0142owe, co czyni go punktem odniesienia dla tego, co NIE jest swoiste dla guza","unit":"class I ligands"},"slug":"hla-ligand-atlas","summary":"A benign-tissue reference peptidome: the set you check a candidate neoantigen against to make sure healthy tissue does not present it too.","tasks":["antigen-presentation"],"url":"https://hla-ligand-atlas.org/","verified_at":"2026-09-05T22:25:59.165582"},{"access":"open","article":"/blog/modele-prezentacji-antygenu","cancer_slugs":["pan-cancer"],"doi":null,"formats":["CSV","PNG"],"hf":null,"huggingface":null,"kind":"dataset","license":"free for academic use","modalities":["immunopeptidomics","protein-sequence"],"name":"MHC Motif Atlas","page":"/ai-oncology/datasets/mhc-motif-atlas","provider":"Gfeller lab, University of Lausanne","size":{"items":1000000,"notes_en":"over a million ligands \u2014 but spread across only about 135 class I molecules, against 30,894 named class I alleles in IPD-IMGT/HLA (June 2026)","notes_pl":"ponad milion ligand\u00f3w \u2014 ale roz\u0142o\u017conych na zaledwie oko\u0142o 135 cz\u0105steczek klasy I, wobec 30 894 nazwanych alleli klasy I w IPD-IMGT/HLA (czerwiec 2026)","unit":"ligands"},"slug":"mhc-motif-atlas","summary":"The reference collection of HLA binding motifs \u2014 and the clearest picture of the field's long tail: a million measured ligands still describe barely 135 of thirty thousand alleles.","tasks":["antigen-presentation"],"url":"http://mhcmotifatlas.org/","verified_at":"2026-09-05T22:25:59.213233"}]}